Cluster: Rep_946_CGC29
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_946
- CGC Family ID: CGCFAM_05649
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_946_c_12 | Rep_946_c_12_41 | 44017 | 45768 | - | 3.A.1.106.13 |
| TC | Rep_946_c_12 | Rep_946_c_12_42 | 45765 | 47552 | - | 3.A.1.106.5 |
| STP | Rep_946_c_12 | Rep_946_c_12_43 | 47668 | 50472 | - | HATPase_c | HisKA | Response_reg | Response_reg |
| pfam | Rep_946_c_12 | Rep_946_c_12_44 | 50660 | 51094 | + | Thioredoxin | HyaE | Thioredoxin_2 | Thioredoxin_9 | Zn_ribbon_Thio2 |
| TC | Rep_946_c_12 | Rep_946_c_12_45 | 51256 | 52638 | + | 2.A.47.5.2 |
| CAZyme | Rep_946_c_12 | Rep_946_c_12_46 | 52703 | 55177 | - | GT35 |
Gene ID: Rep_946_c_12_41
Type: TC
Location: 44017 - 45768 (-)
Type: TC
Location: 44017 - 45768 (-)
Gene ID: Rep_946_c_12_42
Type: TC
Location: 45765 - 47552 (-)
Type: TC
Location: 45765 - 47552 (-)
Gene ID: Rep_946_c_12_43
Type: STP
Location: 47668 - 50472 (-)
Type: STP
Location: 47668 - 50472 (-)
Gene ID: Rep_946_c_12_44
Type: pfam
Location: 50660 - 51094 (+)
Type: pfam
Location: 50660 - 51094 (+)
Gene ID: Rep_946_c_12_45
Type: TC
Location: 51256 - 52638 (+)
Type: TC
Location: 51256 - 52638 (+)
Gene ID: Rep_946_c_12_46
Type: CAZyme
Location: 52703 - 55177 (-)
Type: CAZyme
Location: 52703 - 55177 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Aeromonadaceae
Genus
Aeromonas
Species
Aeromonas veronii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.