Cluster: Rep_946_CGC12
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_946
- CGC Family ID: CGCFAM_03845
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_946_c_5 | Rep_946_c_5_40 | 43971 | 44936 | + | 2.A.4.3.9 |
| NULL(UNKNOWN) | Rep_946_c_5 | Rep_946_c_5_41 | 44984 | 45397 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_946_c_5 | Rep_946_c_5_42 | 45609 | 49724 | + | GH13_13 |
| TC | Rep_946_c_5 | Rep_946_c_5_43 | 49935 | 52394 | - | 3.A.3.6.2 |
| pfam | Rep_946_c_5 | Rep_946_c_5_44 | 52579 | 53079 | + | AhpC-TSA | Redoxin |
| STP | Rep_946_c_5 | Rep_946_c_5_45 | 53138 | 53965 | - | SBP_bac_3 |
| TC | Rep_946_c_5 | Rep_946_c_5_46 | 54109 | 55329 | + | 3.A.18.1.1 |
Gene ID: Rep_946_c_5_40
Type: TC
Location: 43971 - 44936 (+)
Type: TC
Location: 43971 - 44936 (+)
Gene ID: Rep_946_c_5_41
Type:
Location: 44984 - 45397 (-)
Type:
Location: 44984 - 45397 (-)
Gene ID: Rep_946_c_5_42
Type: CAZyme
Location: 45609 - 49724 (+)
Type: CAZyme
Location: 45609 - 49724 (+)
Gene ID: Rep_946_c_5_43
Type: TC
Location: 49935 - 52394 (-)
Type: TC
Location: 49935 - 52394 (-)
Gene ID: Rep_946_c_5_44
Type: pfam
Location: 52579 - 53079 (+)
Type: pfam
Location: 52579 - 53079 (+)
Gene ID: Rep_946_c_5_45
Type: STP
Location: 53138 - 53965 (-)
Type: STP
Location: 53138 - 53965 (-)
Gene ID: Rep_946_c_5_46
Type: TC
Location: 54109 - 55329 (+)
Type: TC
Location: 54109 - 55329 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Aeromonadaceae
Genus
Aeromonas
Species
Aeromonas veronii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.