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Cluster: Rep_945_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_945_c_17 Rep_945_c_17_11 11877 12908 - 1.B.6.1.11
pfam Rep_945_c_17 Rep_945_c_17_12 13188 14312 - Lipase_GDSL | Lipase_GDSL_2
pfam Rep_945_c_17 Rep_945_c_17_13 14430 14810 + BOF
CAZyme Rep_945_c_17 Rep_945_c_17_14 14868 15971 - GH23
pfam Rep_945_c_17 Rep_945_c_17_15 16091 16363 - Iron_traffic
STP Rep_945_c_17 Rep_945_c_17_16 16360 17445 - HhH-GPD
TC Rep_945_c_17 Rep_945_c_17_17 17613 18296 - 9.B.42.1.1
TC Rep_945_c_17 Rep_945_c_17_18 18296 19939 - 9.B.42.1.1
STP Rep_945_c_17 Rep_945_c_17_19 20169 21407 + HD
TC Rep_945_c_17 Rep_945_c_17_20 21498 22763 - 2.A.20.2.4
Gene ID: Rep_945_c_17_11
Type: TC
Location: 11877 - 12908 (-)
Gene ID: Rep_945_c_17_12
Type: pfam
Location: 13188 - 14312 (-)
Gene ID: Rep_945_c_17_13
Type: pfam
Location: 14430 - 14810 (+)
Gene ID: Rep_945_c_17_14
Type: CAZyme
Location: 14868 - 15971 (-)
Gene ID: Rep_945_c_17_15
Type: pfam
Location: 16091 - 16363 (-)
Gene ID: Rep_945_c_17_16
Type: STP
Location: 16360 - 17445 (-)
Gene ID: Rep_945_c_17_17
Type: TC
Location: 17613 - 18296 (-)
Gene ID: Rep_945_c_17_18
Type: TC
Location: 18296 - 19939 (-)
Gene ID: Rep_945_c_17_19
Type: STP
Location: 20169 - 21407 (+)
Gene ID: Rep_945_c_17_20
Type: TC
Location: 21498 - 22763 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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