Cluster: Rep_945_CGC8
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_945
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_945_c_16 | Rep_945_c_16_1 | 149 | 1900 | - | 3.A.1.106.13 |
| TC | Rep_945_c_16 | Rep_945_c_16_2 | 2010 | 3785 | - | 3.A.1.106.5 |
| STP | Rep_945_c_16 | Rep_945_c_16_3 | 3886 | 6684 | - | HATPase_c | HisKA | Response_reg | Response_reg |
| pfam | Rep_945_c_16 | Rep_945_c_16_4 | 6838 | 7278 | + | Thioredoxin | Thioredoxin_2 | Thioredoxin_9 | Zn_ribbon_Thio2 |
| TC | Rep_945_c_16 | Rep_945_c_16_5 | 7433 | 8821 | + | 2.A.47.5.2 |
| pfam | Rep_945_c_16 | Rep_945_c_16_6 | 9023 | 9589 | + | Ni_hydr_CYTB |
| CAZyme | Rep_945_c_16 | Rep_945_c_16_7 | 9654 | 12128 | - | GT35 |
Gene ID: Rep_945_c_16_1
Type: TC
Location: 149 - 1900 (-)
Type: TC
Location: 149 - 1900 (-)
Gene ID: Rep_945_c_16_2
Type: TC
Location: 2010 - 3785 (-)
Type: TC
Location: 2010 - 3785 (-)
Gene ID: Rep_945_c_16_3
Type: STP
Location: 3886 - 6684 (-)
Type: STP
Location: 3886 - 6684 (-)
Gene ID: Rep_945_c_16_4
Type: pfam
Location: 6838 - 7278 (+)
Type: pfam
Location: 6838 - 7278 (+)
Gene ID: Rep_945_c_16_5
Type: TC
Location: 7433 - 8821 (+)
Type: TC
Location: 7433 - 8821 (+)
Gene ID: Rep_945_c_16_6
Type: pfam
Location: 9023 - 9589 (+)
Type: pfam
Location: 9023 - 9589 (+)
Gene ID: Rep_945_c_16_7
Type: CAZyme
Location: 9654 - 12128 (-)
Type: CAZyme
Location: 9654 - 12128 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Aeromonadaceae
Genus
Aeromonas
Species
Aeromonas caviae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.