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Cluster: Rep_945_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_945_c_15 Rep_945_c_15_57 55491 56303 + 3.A.1.24.5
TC Rep_945_c_15 Rep_945_c_15_58 56300 57094 + 3.A.1.24.1
TC Rep_945_c_15 Rep_945_c_15_59 57079 57750 + 3.A.1.24.5
pfam Rep_945_c_15 Rep_945_c_15_60 57845 58411 - EFP | EFP_N | Elong-fact-P_C
CAZyme Rep_945_c_15 Rep_945_c_15_61 58457 59653 - GT104
pfam Rep_945_c_15 Rep_945_c_15_62 59749 60792 - IMPDH
pfam Rep_945_c_15 Rep_945_c_15_63 61172 61663 + Zn_protease
TC Rep_945_c_15 Rep_945_c_15_64 61731 63170 - 2.A.21.9.2
Gene ID: Rep_945_c_15_57
Type: TC
Location: 55491 - 56303 (+)
Gene ID: Rep_945_c_15_58
Type: TC
Location: 56300 - 57094 (+)
Gene ID: Rep_945_c_15_59
Type: TC
Location: 57079 - 57750 (+)
Gene ID: Rep_945_c_15_60
Type: pfam
Location: 57845 - 58411 (-)
Gene ID: Rep_945_c_15_61
Type: CAZyme
Location: 58457 - 59653 (-)
Gene ID: Rep_945_c_15_62
Type: pfam
Location: 59749 - 60792 (-)
Gene ID: Rep_945_c_15_63
Type: pfam
Location: 61172 - 61663 (+)
Gene ID: Rep_945_c_15_64
Type: TC
Location: 61731 - 63170 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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