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Cluster: Rep_945_CGC38

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_945_c_122 Rep_945_c_122_59 56354 57652 - 4.A.3.2.6
TC Rep_945_c_122 Rep_945_c_122_60 57897 58202 + 4.A.3.2.9
TC Rep_945_c_122 Rep_945_c_122_61 58230 59576 + 4.A.3.2.6
CAZyme Rep_945_c_122 Rep_945_c_122_62 59624 61006 + GH1
TC Rep_945_c_122 Rep_945_c_122_63 61039 61350 + 4.A.3.2.7
STP Rep_945_c_122 Rep_945_c_122_64 61365 62267 + Glucokinase
TC Rep_945_c_122 Rep_945_c_122_65 62403 63749 + 1.B.3.1.1
CAZyme Rep_945_c_122 Rep_945_c_122_66 63761 65950 + CBM35 | GH5_41
NULL(UNKNOWN) Rep_945_c_122 Rep_945_c_122_67 66139 66291 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_945_c_122 Rep_945_c_122_68 66251 66592 + CBM35
CAZyme Rep_945_c_122 Rep_945_c_122_69 66813 68021 + GH5_55
Gene ID: Rep_945_c_122_59
Type: TC
Location: 56354 - 57652 (-)
Gene ID: Rep_945_c_122_60
Type: TC
Location: 57897 - 58202 (+)
Gene ID: Rep_945_c_122_61
Type: TC
Location: 58230 - 59576 (+)
Gene ID: Rep_945_c_122_62
Type: CAZyme
Location: 59624 - 61006 (+)
Gene ID: Rep_945_c_122_63
Type: TC
Location: 61039 - 61350 (+)
Gene ID: Rep_945_c_122_64
Type: STP
Location: 61365 - 62267 (+)
Gene ID: Rep_945_c_122_65
Type: TC
Location: 62403 - 63749 (+)
Gene ID: Rep_945_c_122_66
Type: CAZyme
Location: 63761 - 65950 (+)
Gene ID: Rep_945_c_122_67
Type:
Location: 66139 - 66291 (+)
Gene ID: Rep_945_c_122_68
Type: CAZyme
Location: 66251 - 66592 (+)
Gene ID: Rep_945_c_122_69
Type: CAZyme
Location: 66813 - 68021 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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