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Cluster: Rep_945_CGC36

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_945_c_116 Rep_945_c_116_1 629 1387 + 1.A.30.1.5
TC Rep_945_c_116 Rep_945_c_116_2 1365 2240 + 1.A.30.1.5
TC Rep_945_c_116 Rep_945_c_116_3 2497 2901 + 3.D.1.1.1
TC Rep_945_c_116 Rep_945_c_116_4 2931 3605 + 3.D.1.1.1
TC Rep_945_c_116 Rep_945_c_116_5 3608 5413 + 3.D.1.1.1
TC Rep_945_c_116 Rep_945_c_116_6 5486 6025 + 3.D.1.1.1
TC Rep_945_c_116 Rep_945_c_116_7 6022 7407 + 3.D.1.1.1
TC Rep_945_c_116 Rep_945_c_116_8 7465 10194 + 3.D.1.1.1
TC Rep_945_c_116 Rep_945_c_116_9 10191 11156 + 3.D.1.1.1
TC Rep_945_c_116 Rep_945_c_116_10 11247 11789 + 3.D.1.1.1
TC Rep_945_c_116 Rep_945_c_116_11 11799 12338 + 3.D.1.1.1
TC Rep_945_c_116 Rep_945_c_116_12 12418 12726 + 3.D.1.1.1
TC Rep_945_c_116 Rep_945_c_116_13 12723 14570 + 3.D.1.1.1
TC Rep_945_c_116 Rep_945_c_116_14 14625 16157 + 3.D.1.1.1
TC Rep_945_c_116 Rep_945_c_116_15 16201 17664 + 3.D.1.1.1
peptidase Rep_945_c_116 Rep_945_c_116_16 17934 21827 - C26.UPW
CAZyme Rep_945_c_116 Rep_945_c_116_17 22010 23470 + GH23
Gene ID: Rep_945_c_116_1
Type: TC
Location: 629 - 1387 (+)
Gene ID: Rep_945_c_116_2
Type: TC
Location: 1365 - 2240 (+)
Gene ID: Rep_945_c_116_3
Type: TC
Location: 2497 - 2901 (+)
Gene ID: Rep_945_c_116_4
Type: TC
Location: 2931 - 3605 (+)
Gene ID: Rep_945_c_116_5
Type: TC
Location: 3608 - 5413 (+)
Gene ID: Rep_945_c_116_6
Type: TC
Location: 5486 - 6025 (+)
Gene ID: Rep_945_c_116_7
Type: TC
Location: 6022 - 7407 (+)
Gene ID: Rep_945_c_116_8
Type: TC
Location: 7465 - 10194 (+)
Gene ID: Rep_945_c_116_9
Type: TC
Location: 10191 - 11156 (+)
Gene ID: Rep_945_c_116_10
Type: TC
Location: 11247 - 11789 (+)
Gene ID: Rep_945_c_116_11
Type: TC
Location: 11799 - 12338 (+)
Gene ID: Rep_945_c_116_12
Type: TC
Location: 12418 - 12726 (+)
Gene ID: Rep_945_c_116_13
Type: TC
Location: 12723 - 14570 (+)
Gene ID: Rep_945_c_116_14
Type: TC
Location: 14625 - 16157 (+)
Gene ID: Rep_945_c_116_15
Type: TC
Location: 16201 - 17664 (+)
Gene ID: Rep_945_c_116_16
Type: peptidase
Location: 17934 - 21827 (-)
Gene ID: Rep_945_c_116_17
Type: CAZyme
Location: 22010 - 23470 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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