Cluster: Rep_945_CGC3
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_945
- CGC Family ID: CGCFAM_03845
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_945_c_11 | Rep_945_c_11_9 | 6796 | 8400 | + | 3.A.1.5.1 |
| NULL(UNKNOWN) | Rep_945_c_11 | Rep_945_c_11_10 | 8511 | 8810 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_945_c_11 | Rep_945_c_11_11 | 8963 | 10522 | + | 1.B.52.2.1 |
| TC | Rep_945_c_11 | Rep_945_c_11_12 | 10619 | 11839 | - | 3.A.18.1.1 |
| pfam | Rep_945_c_11 | Rep_945_c_11_13 | 11986 | 12486 | - | AhpC-TSA | Redoxin |
| TC | Rep_945_c_11 | Rep_945_c_11_14 | 12741 | 15164 | + | 3.A.3.6.2 |
| CAZyme | Rep_945_c_11 | Rep_945_c_11_15 | 15359 | 19462 | - | GH13_13 |
| NULL(UNKNOWN) | Rep_945_c_11 | Rep_945_c_11_16 | 19673 | 20074 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_945_c_11 | Rep_945_c_11_17 | 20090 | 21031 | - | 2.A.4.3.9 |
| pfam | Rep_945_c_11 | Rep_945_c_11_18 | 21103 | 21378 | + | Trns_repr_metal |
| TC | Rep_945_c_11 | Rep_945_c_11_19 | 21407 | 24847 | - | 1.B.55.3.1 |
| CAZyme | Rep_945_c_11 | Rep_945_c_11_20 | 24832 | 25941 | - | GH8 |
| TC | Rep_945_c_11 | Rep_945_c_11_21 | 25945 | 28170 | - | 4.D.3.1.6 |
| CAZyme | Rep_945_c_11 | Rep_945_c_11_22 | 28167 | 30734 | - | GT2 |
Gene ID: Rep_945_c_11_9
Type: TC
Location: 6796 - 8400 (+)
Type: TC
Location: 6796 - 8400 (+)
Gene ID: Rep_945_c_11_10
Type:
Location: 8511 - 8810 (+)
Type:
Location: 8511 - 8810 (+)
Gene ID: Rep_945_c_11_11
Type: TC
Location: 8963 - 10522 (+)
Type: TC
Location: 8963 - 10522 (+)
Gene ID: Rep_945_c_11_12
Type: TC
Location: 10619 - 11839 (-)
Type: TC
Location: 10619 - 11839 (-)
Gene ID: Rep_945_c_11_13
Type: pfam
Location: 11986 - 12486 (-)
Type: pfam
Location: 11986 - 12486 (-)
Gene ID: Rep_945_c_11_14
Type: TC
Location: 12741 - 15164 (+)
Type: TC
Location: 12741 - 15164 (+)
Gene ID: Rep_945_c_11_15
Type: CAZyme
Location: 15359 - 19462 (-)
Type: CAZyme
Location: 15359 - 19462 (-)
Gene ID: Rep_945_c_11_16
Type:
Location: 19673 - 20074 (+)
Type:
Location: 19673 - 20074 (+)
Gene ID: Rep_945_c_11_17
Type: TC
Location: 20090 - 21031 (-)
Type: TC
Location: 20090 - 21031 (-)
Gene ID: Rep_945_c_11_18
Type: pfam
Location: 21103 - 21378 (+)
Type: pfam
Location: 21103 - 21378 (+)
Gene ID: Rep_945_c_11_19
Type: TC
Location: 21407 - 24847 (-)
Type: TC
Location: 21407 - 24847 (-)
Gene ID: Rep_945_c_11_20
Type: CAZyme
Location: 24832 - 25941 (-)
Type: CAZyme
Location: 24832 - 25941 (-)
Gene ID: Rep_945_c_11_21
Type: TC
Location: 25945 - 28170 (-)
Type: TC
Location: 25945 - 28170 (-)
Gene ID: Rep_945_c_11_22
Type: CAZyme
Location: 28167 - 30734 (-)
Type: CAZyme
Location: 28167 - 30734 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Aeromonadaceae
Genus
Aeromonas
Species
Aeromonas caviae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.