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Cluster: Rep_945_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_945_c_66 Rep_945_c_66_14 14635 15990 - 2.A.40.7.6
NULL(UNKNOWN) Rep_945_c_66 Rep_945_c_66_15 16246 16575 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_945_c_66 Rep_945_c_66_16 16687 18354 - 3.A.1.120.6
CAZyme Rep_945_c_66 Rep_945_c_66_17 18631 19476 - GH23
CAZyme Rep_945_c_66 Rep_945_c_66_18 19820 20560 + GT2
TC Rep_945_c_66 Rep_945_c_66_19 20649 21014 + 2.A.123.4.3
CAZyme Rep_945_c_66 Rep_945_c_66_20 20992 22692 + GT83
pfam Rep_945_c_66 Rep_945_c_66_21 22774 23772 - 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | GDP_Man_Dehyd
pfam Rep_945_c_66 Rep_945_c_66_22 23769 25130 - UDPG_MGDP_dh | 3HCDH_N | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
TC Rep_945_c_66 Rep_945_c_66_23 25438 26046 + 2.A.115.1.3
TC Rep_945_c_66 Rep_945_c_66_24 26260 27048 - 3.A.1.14.19
TC Rep_945_c_66 Rep_945_c_66_25 27064 28092 - 3.A.1.14.19
TC Rep_945_c_66 Rep_945_c_66_26 28092 28937 - 3.A.1.14.19
Gene ID: Rep_945_c_66_14
Type: TC
Location: 14635 - 15990 (-)
Gene ID: Rep_945_c_66_15
Type:
Location: 16246 - 16575 (-)
Gene ID: Rep_945_c_66_16
Type: TC
Location: 16687 - 18354 (-)
Gene ID: Rep_945_c_66_17
Type: CAZyme
Location: 18631 - 19476 (-)
Gene ID: Rep_945_c_66_18
Type: CAZyme
Location: 19820 - 20560 (+)
Gene ID: Rep_945_c_66_19
Type: TC
Location: 20649 - 21014 (+)
Gene ID: Rep_945_c_66_20
Type: CAZyme
Location: 20992 - 22692 (+)
Gene ID: Rep_945_c_66_21
Type: pfam
Location: 22774 - 23772 (-)
Gene ID: Rep_945_c_66_22
Type: pfam
Location: 23769 - 25130 (-)
Gene ID: Rep_945_c_66_23
Type: TC
Location: 25438 - 26046 (+)
Gene ID: Rep_945_c_66_24
Type: TC
Location: 26260 - 27048 (-)
Gene ID: Rep_945_c_66_25
Type: TC
Location: 27064 - 28092 (-)
Gene ID: Rep_945_c_66_26
Type: TC
Location: 28092 - 28937 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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