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Cluster: Rep_945_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_945_c_57 Rep_945_c_57_49 60321 61043 - 2.A.109.2.3
pfam Rep_945_c_57 Rep_945_c_57_50 61160 62275 + NAD_kinase | NAD_kinase_C
pfam Rep_945_c_57 Rep_945_c_57_51 62383 62661 + YfcL
TC Rep_945_c_57 Rep_945_c_57_52 62761 64425 + 4.C.1.1.14
pfam Rep_945_c_57 Rep_945_c_57_53 65031 65912 - dCMP_cyt_deam_1 | dCMP_cyt_deam_2
TC Rep_945_c_57 Rep_945_c_57_54 66139 66825 - 2.A.122.1.1
TC Rep_945_c_57 Rep_945_c_57_55 66822 67181 - 1.E.14.1.4
CAZyme Rep_945_c_57 Rep_945_c_57_56 67312 69027 + GH36
Gene ID: Rep_945_c_57_49
Type: TC
Location: 60321 - 61043 (-)
Gene ID: Rep_945_c_57_50
Type: pfam
Location: 61160 - 62275 (+)
Gene ID: Rep_945_c_57_51
Type: pfam
Location: 62383 - 62661 (+)
Gene ID: Rep_945_c_57_52
Type: TC
Location: 62761 - 64425 (+)
Gene ID: Rep_945_c_57_53
Type: pfam
Location: 65031 - 65912 (-)
Gene ID: Rep_945_c_57_54
Type: TC
Location: 66139 - 66825 (-)
Gene ID: Rep_945_c_57_55
Type: TC
Location: 66822 - 67181 (-)
Gene ID: Rep_945_c_57_56
Type: CAZyme
Location: 67312 - 69027 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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