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Cluster: Rep_945_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_945_c_9 Rep_945_c_9_53 53371 55344 - 1.B.52.2.2
CAZyme Rep_945_c_9 Rep_945_c_9_54 55438 58116 - GH3
CAZyme Rep_945_c_9 Rep_945_c_9_55 58835 61186 + CBM4 | GH9
TC Rep_945_c_9 Rep_945_c_9_56 62015 62320 + 4.A.3.2.9
TC Rep_945_c_9 Rep_945_c_9_57 62348 63700 + 4.A.3.2.6
CAZyme Rep_945_c_9 Rep_945_c_9_58 63833 65137 + GH1
TC Rep_945_c_9 Rep_945_c_9_59 65151 65459 + 4.A.3.2.7
CAZyme Rep_945_c_9 Rep_945_c_9_60 65700 66395 + GH16_21
Gene ID: Rep_945_c_9_53
Type: TC
Location: 53371 - 55344 (-)
Gene ID: Rep_945_c_9_54
Type: CAZyme
Location: 55438 - 58116 (-)
Gene ID: Rep_945_c_9_55
Type: CAZyme
Location: 58835 - 61186 (+)
Gene ID: Rep_945_c_9_56
Type: TC
Location: 62015 - 62320 (+)
Gene ID: Rep_945_c_9_57
Type: TC
Location: 62348 - 63700 (+)
Gene ID: Rep_945_c_9_58
Type: CAZyme
Location: 63833 - 65137 (+)
Gene ID: Rep_945_c_9_59
Type: TC
Location: 65151 - 65459 (+)
Gene ID: Rep_945_c_9_60
Type: CAZyme
Location: 65700 - 66395 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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