Cluster: Rep_945_CGC17
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_945
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_945_c_48 | Rep_945_c_48_4 | 4165 | 4800 | - | 2.A.115.1.4 |
| CAZyme | Rep_945_c_48 | Rep_945_c_48_5 | 5600 | 7033 | - | GH13_42 |
| pfam | Rep_945_c_48 | Rep_945_c_48_6 | 7040 | 8806 | - | Alpha-amylase | CHB_HEX_C_1 | PKD_4 | K319L-like_PKD |
| TC | Rep_945_c_48 | Rep_945_c_48_7 | 9183 | 10091 | + | 2.A.7.3.9 |
| pfam | Rep_945_c_48 | Rep_945_c_48_8 | 10198 | 11562 | + | tRNA_anti-codon | Exonuc_VII_L | tRNA_anti_2 |
| pfam | Rep_945_c_48 | Rep_945_c_48_9 | 11619 | 12974 | - | Radical_SAM |
| TC | Rep_945_c_48 | Rep_945_c_48_10 | 13250 | 13738 | - | 1.B.6.1.21 |
Gene ID: Rep_945_c_48_4
Type: TC
Location: 4165 - 4800 (-)
Type: TC
Location: 4165 - 4800 (-)
Gene ID: Rep_945_c_48_5
Type: CAZyme
Location: 5600 - 7033 (-)
Type: CAZyme
Location: 5600 - 7033 (-)
Gene ID: Rep_945_c_48_6
Type: pfam
Location: 7040 - 8806 (-)
Type: pfam
Location: 7040 - 8806 (-)
Gene ID: Rep_945_c_48_7
Type: TC
Location: 9183 - 10091 (+)
Type: TC
Location: 9183 - 10091 (+)
Gene ID: Rep_945_c_48_8
Type: pfam
Location: 10198 - 11562 (+)
Type: pfam
Location: 10198 - 11562 (+)
Gene ID: Rep_945_c_48_9
Type: pfam
Location: 11619 - 12974 (-)
Type: pfam
Location: 11619 - 12974 (-)
Gene ID: Rep_945_c_48_10
Type: TC
Location: 13250 - 13738 (-)
Type: TC
Location: 13250 - 13738 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Aeromonadaceae
Genus
Aeromonas
Species
Aeromonas caviae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.