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Cluster: Rep_945_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_945_c_37 Rep_945_c_37_4 1485 2678 - 2.A.42.1.1
TF Rep_945_c_37 Rep_945_c_37_5 2986 3969 - LacI
TC Rep_945_c_37 Rep_945_c_37_6 4280 5380 + 4.A.2.1.1
STP Rep_945_c_37 Rep_945_c_37_7 5380 6369 + PfkB
TC Rep_945_c_37 Rep_945_c_37_8 6366 8090 + 4.A.2.1.17
pfam Rep_945_c_37 Rep_945_c_37_9 8173 8424 - DUF1289
CAZyme Rep_945_c_37 Rep_945_c_37_10 8575 9726 + GH102
Gene ID: Rep_945_c_37_4
Type: TC
Location: 1485 - 2678 (-)
Gene ID: Rep_945_c_37_5
Type: TF
Location: 2986 - 3969 (-)
Gene ID: Rep_945_c_37_6
Type: TC
Location: 4280 - 5380 (+)
Gene ID: Rep_945_c_37_7
Type: STP
Location: 5380 - 6369 (+)
Gene ID: Rep_945_c_37_8
Type: TC
Location: 6366 - 8090 (+)
Gene ID: Rep_945_c_37_9
Type: pfam
Location: 8173 - 8424 (-)
Gene ID: Rep_945_c_37_10
Type: CAZyme
Location: 8575 - 9726 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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