Cluster: Rep_927_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_927
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_927_c_3 | Rep_927_c_3_87 | 81811 | 83256 | - | 2.A.66.2.16 |
| NULL(UNKNOWN) | Rep_927_c_3 | Rep_927_c_3_88 | 83253 | 84428 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_927_c_3 | Rep_927_c_3_89 | 84437 | 85435 | - | GT2 |
| CAZyme | Rep_927_c_3 | Rep_927_c_3_90 | 85451 | 86506 | - | GT2 |
| pfam | Rep_927_c_3 | Rep_927_c_3_91 | 86499 | 87311 | - | LicD |
| CAZyme | Rep_927_c_3 | Rep_927_c_3_92 | 87315 | 88115 | - | GT111 |
Gene ID: Rep_927_c_3_87
Type: TC
Location: 81811 - 83256 (-)
Type: TC
Location: 81811 - 83256 (-)
Gene ID: Rep_927_c_3_88
Type:
Location: 83253 - 84428 (-)
Type:
Location: 83253 - 84428 (-)
Gene ID: Rep_927_c_3_89
Type: CAZyme
Location: 84437 - 85435 (-)
Type: CAZyme
Location: 84437 - 85435 (-)
Gene ID: Rep_927_c_3_90
Type: CAZyme
Location: 85451 - 86506 (-)
Type: CAZyme
Location: 85451 - 86506 (-)
Gene ID: Rep_927_c_3_91
Type: pfam
Location: 86499 - 87311 (-)
Type: pfam
Location: 86499 - 87311 (-)
Gene ID: Rep_927_c_3_92
Type: CAZyme
Location: 87315 - 88115 (-)
Type: CAZyme
Location: 87315 - 88115 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.