Cluster: Rep_927_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_927
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_927_c_2 | Rep_927_c_2_31 | 28207 | 29034 | + | CE1 |
| TC | Rep_927_c_2 | Rep_927_c_2_32 | 29977 | 33210 | - | 1.B.12.5.3 |
| pfam | Rep_927_c_2 | Rep_927_c_2_33 | 33416 | 34432 | + | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NmrA | NAD_binding_4 | KR | GDP_Man_Dehyd |
| TC | Rep_927_c_2 | Rep_927_c_2_34 | 34513 | 35787 | + | 2.A.1.25.3 |
Gene ID: Rep_927_c_2_31
Type: CAZyme
Location: 28207 - 29034 (+)
Type: CAZyme
Location: 28207 - 29034 (+)
Gene ID: Rep_927_c_2_32
Type: TC
Location: 29977 - 33210 (-)
Type: TC
Location: 29977 - 33210 (-)
Gene ID: Rep_927_c_2_33
Type: pfam
Location: 33416 - 34432 (+)
Type: pfam
Location: 33416 - 34432 (+)
Gene ID: Rep_927_c_2_34
Type: TC
Location: 34513 - 35787 (+)
Type: TC
Location: 34513 - 35787 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.