dbCAN Logo

Cluster: Rep_927_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_927_c_6 Rep_927_c_6_93 72609 73637 + GT9
TC Rep_927_c_6 Rep_927_c_6_94 73587 74252 - 2.A.115.2.7
pfam Rep_927_c_6 Rep_927_c_6_95 74443 75984 + PFL-like | YjjI-like
TC Rep_927_c_6 Rep_927_c_6_96 76026 77891 - 2.A.16.2.2
TC Rep_927_c_6 Rep_927_c_6_97 77891 78196 - 9.B.21.2.1
Gene ID: Rep_927_c_6_93
Type: CAZyme
Location: 72609 - 73637 (+)
Gene ID: Rep_927_c_6_94
Type: TC
Location: 73587 - 74252 (-)
Gene ID: Rep_927_c_6_95
Type: pfam
Location: 74443 - 75984 (+)
Gene ID: Rep_927_c_6_96
Type: TC
Location: 76026 - 77891 (-)
Gene ID: Rep_927_c_6_97
Type: TC
Location: 77891 - 78196 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_927_c_6_93 vegan > omnivore 1.36715 0.00918
Rep_927_c_6_93 vegetarian > omnivore 1.01157 0.01613
Rep_927_c_6_94 vegan > omnivore 1.17553 0.00918
Rep_927_c_6_94 vegetarian > omnivore 1.18723 0.01613

🧭 Explore Read Mapping of CGC

← Back to Cluster List