Cluster: Rep_927_CGC14
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_927
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_927_c_5 | Rep_927_c_5_94 | 102380 | 103432 | - | GT28 |
| TC | Rep_927_c_5 | Rep_927_c_5_95 | 103441 | 104625 | - | 2.A.103.1.1 |
| pfam | Rep_927_c_5 | Rep_927_c_5_96 | 104641 | 105954 | - | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | Rep_927_c_5 | Rep_927_c_5_97 | 106017 | 107099 | - | 9.B.146.1.6 |
Gene ID: Rep_927_c_5_94
Type: CAZyme
Location: 102380 - 103432 (-)
Type: CAZyme
Location: 102380 - 103432 (-)
Gene ID: Rep_927_c_5_95
Type: TC
Location: 103441 - 104625 (-)
Type: TC
Location: 103441 - 104625 (-)
Gene ID: Rep_927_c_5_96
Type: pfam
Location: 104641 - 105954 (-)
Type: pfam
Location: 104641 - 105954 (-)
Gene ID: Rep_927_c_5_97
Type: TC
Location: 106017 - 107099 (-)
Type: TC
Location: 106017 - 107099 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.