Cluster: Rep_916_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_916
- CGC Family ID: CGCFAM_11032
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_916_c_30 | Rep_916_c_30_7 | 5455 | 6861 | - | GH32 |
| STP | Rep_916_c_30 | Rep_916_c_30_8 | 6965 | 7888 | - | PfkB |
| pfam | Rep_916_c_30 | Rep_916_c_30_9 | 8025 | 9110 | + | Cu-oxidase | Cu-oxidase_2 | Cu-oxidase_3 |
| TC | Rep_916_c_30 | Rep_916_c_30_10 | 9175 | 9837 | - | 1.A.62.2.3 |
Gene ID: Rep_916_c_30_7
Type: CAZyme
Location: 5455 - 6861 (-)
Type: CAZyme
Location: 5455 - 6861 (-)
Gene ID: Rep_916_c_30_8
Type: STP
Location: 6965 - 7888 (-)
Type: STP
Location: 6965 - 7888 (-)
Gene ID: Rep_916_c_30_9
Type: pfam
Location: 8025 - 9110 (+)
Type: pfam
Location: 8025 - 9110 (+)
Gene ID: Rep_916_c_30_10
Type: TC
Location: 9175 - 9837 (-)
Type: TC
Location: 9175 - 9837 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.