Cluster: Rep_916_CGC8
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_916
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_916_c_17 | Rep_916_c_17_1 | 3 | 326 | - | 3.A.1.120.3 |
| pfam | Rep_916_c_17 | Rep_916_c_17_2 | 718 | 1029 | - | BolA |
| TC | Rep_916_c_17 | Rep_916_c_17_3 | 1084 | 1851 | - | 3.A.1.11.1 |
| TC | Rep_916_c_17 | Rep_916_c_17_4 | 1851 | 2711 | - | 3.A.1.11.1 |
| TC | Rep_916_c_17 | Rep_916_c_17_5 | 2701 | 3813 | - | 3.A.1.11.1 |
| pfam | Rep_916_c_17 | Rep_916_c_17_6 | 4093 | 4791 | + | Metallophos |
| CAZyme | Rep_916_c_17 | Rep_916_c_17_7 | 4788 | 5582 | + | GT2 |
Gene ID: Rep_916_c_17_1
Type: TC
Location: 3 - 326 (-)
Type: TC
Location: 3 - 326 (-)
Gene ID: Rep_916_c_17_2
Type: pfam
Location: 718 - 1029 (-)
Type: pfam
Location: 718 - 1029 (-)
Gene ID: Rep_916_c_17_3
Type: TC
Location: 1084 - 1851 (-)
Type: TC
Location: 1084 - 1851 (-)
Gene ID: Rep_916_c_17_4
Type: TC
Location: 1851 - 2711 (-)
Type: TC
Location: 1851 - 2711 (-)
Gene ID: Rep_916_c_17_5
Type: TC
Location: 2701 - 3813 (-)
Type: TC
Location: 2701 - 3813 (-)
Gene ID: Rep_916_c_17_6
Type: pfam
Location: 4093 - 4791 (+)
Type: pfam
Location: 4093 - 4791 (+)
Gene ID: Rep_916_c_17_7
Type: CAZyme
Location: 4788 - 5582 (+)
Type: CAZyme
Location: 4788 - 5582 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.