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Cluster: Rep_916_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_916_c_13 Rep_916_c_13_1 2 748 - 3.A.1.140.1
TC Rep_916_c_13 Rep_916_c_13_2 764 1420 - 3.A.1.140.1
TC Rep_916_c_13 Rep_916_c_13_3 1453 2922 - 3.A.5.1.1
pfam Rep_916_c_13 Rep_916_c_13_4 3042 3893 - Thymidylat_synt
NULL(UNKNOWN) Rep_916_c_13 Rep_916_c_13_5 3975 4535 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_916_c_13 Rep_916_c_13_6 4653 6671 + GH77
STP Rep_916_c_13 Rep_916_c_13_7 6713 7720 - AAA
pfam Rep_916_c_13 Rep_916_c_13_8 7742 8347 - RuvA_N | RuvA_C | HHH_5
TC Rep_916_c_13 Rep_916_c_13_9 8640 9938 - 9.A.40.2.2
pfam Rep_916_c_13 Rep_916_c_13_10 9989 10633 - PseudoU_synth_2
pfam Rep_916_c_13 Rep_916_c_13_11 10679 11311 + His_Phos_1
TC Rep_916_c_13 Rep_916_c_13_12 11334 12332 + 2.A.109.1.1
TC Rep_916_c_13 Rep_916_c_13_13 12367 12999 - 2.A.76.1.2
Gene ID: Rep_916_c_13_1
Type: TC
Location: 2 - 748 (-)
Gene ID: Rep_916_c_13_2
Type: TC
Location: 764 - 1420 (-)
Gene ID: Rep_916_c_13_3
Type: TC
Location: 1453 - 2922 (-)
Gene ID: Rep_916_c_13_4
Type: pfam
Location: 3042 - 3893 (-)
Gene ID: Rep_916_c_13_5
Type:
Location: 3975 - 4535 (+)
Gene ID: Rep_916_c_13_6
Type: CAZyme
Location: 4653 - 6671 (+)
Gene ID: Rep_916_c_13_7
Type: STP
Location: 6713 - 7720 (-)
Gene ID: Rep_916_c_13_8
Type: pfam
Location: 7742 - 8347 (-)
Gene ID: Rep_916_c_13_9
Type: TC
Location: 8640 - 9938 (-)
Gene ID: Rep_916_c_13_10
Type: pfam
Location: 9989 - 10633 (-)
Gene ID: Rep_916_c_13_11
Type: pfam
Location: 10679 - 11311 (+)
Gene ID: Rep_916_c_13_12
Type: TC
Location: 11334 - 12332 (+)
Gene ID: Rep_916_c_13_13
Type: TC
Location: 12367 - 12999 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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