Cluster: Rep_916_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_916
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_916_c_12 | Rep_916_c_12_12 | 11021 | 11755 | + | 3.A.1.3.3 |
| TC | Rep_916_c_12 | Rep_916_c_12_13 | 11785 | 12507 | + | 3.A.1.3.3 |
| TC | Rep_916_c_12 | Rep_916_c_12_14 | 12511 | 13182 | + | 3.A.1.3.3 |
| TC | Rep_916_c_12 | Rep_916_c_12_15 | 13182 | 13847 | + | 3.A.1.3.3 |
| TC | Rep_916_c_12 | Rep_916_c_12_16 | 13976 | 14641 | + | 2.A.88.8.6 |
| CAZyme | Rep_916_c_12 | Rep_916_c_12_17 | 15038 | 15820 | - | GT32 |
Gene ID: Rep_916_c_12_12
Type: TC
Location: 11021 - 11755 (+)
Type: TC
Location: 11021 - 11755 (+)
Gene ID: Rep_916_c_12_13
Type: TC
Location: 11785 - 12507 (+)
Type: TC
Location: 11785 - 12507 (+)
Gene ID: Rep_916_c_12_14
Type: TC
Location: 12511 - 13182 (+)
Type: TC
Location: 12511 - 13182 (+)
Gene ID: Rep_916_c_12_15
Type: TC
Location: 13182 - 13847 (+)
Type: TC
Location: 13182 - 13847 (+)
Gene ID: Rep_916_c_12_16
Type: TC
Location: 13976 - 14641 (+)
Type: TC
Location: 13976 - 14641 (+)
Gene ID: Rep_916_c_12_17
Type: CAZyme
Location: 15038 - 15820 (-)
Type: CAZyme
Location: 15038 - 15820 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.