Cluster: Rep_916_CGC5
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_916
- CGC Family ID: CGCFAM_11031
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_916_c_10 | Rep_916_c_10_18 | 16923 | 17549 | + | 1.B.46.1.1 |
| TF | Rep_916_c_10 | Rep_916_c_10_19 | 17618 | 17926 | + | Trp_repressor |
| CAZyme | Rep_916_c_10 | Rep_916_c_10_20 | 17913 | 18569 | + | GT51 |
Gene ID: Rep_916_c_10_18
Type: TC
Location: 16923 - 17549 (+)
Type: TC
Location: 16923 - 17549 (+)
Gene ID: Rep_916_c_10_19
Type: TF
Location: 17618 - 17926 (+)
Type: TF
Location: 17618 - 17926 (+)
Gene ID: Rep_916_c_10_20
Type: CAZyme
Location: 17913 - 18569 (+)
Type: CAZyme
Location: 17913 - 18569 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.