Cluster: Rep_916_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_916
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_916_c_6 | Rep_916_c_6_2 | 1547 | 2998 | + | GH23 |
| NULL(UNKNOWN) | Rep_916_c_6 | Rep_916_c_6_3 | 2988 | 3125 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_916_c_6 | Rep_916_c_6_4 | 3190 | 4740 | - | Sulfatase |
| TC | Rep_916_c_6 | Rep_916_c_6_5 | 4928 | 6112 | - | 2.A.33.1.1 |
| TC | Rep_916_c_6 | Rep_916_c_6_6 | 6299 | 6727 | + | 2.A.7.2.1 |
Gene ID: Rep_916_c_6_2
Type: CAZyme
Location: 1547 - 2998 (+)
Type: CAZyme
Location: 1547 - 2998 (+)
Gene ID: Rep_916_c_6_3
Type:
Location: 2988 - 3125 (+)
Type:
Location: 2988 - 3125 (+)
Gene ID: Rep_916_c_6_4
Type: pfam
Location: 3190 - 4740 (-)
Type: pfam
Location: 3190 - 4740 (-)
Gene ID: Rep_916_c_6_5
Type: TC
Location: 4928 - 6112 (-)
Type: TC
Location: 4928 - 6112 (-)
Gene ID: Rep_916_c_6_6
Type: TC
Location: 6299 - 6727 (+)
Type: TC
Location: 6299 - 6727 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.