Cluster: Rep_916_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_916
- CGC Family ID: CGCFAM_00063
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_916_c_2 | Rep_916_c_2_17 | 13326 | 15104 | + | GT35 |
| pfam | Rep_916_c_2 | Rep_916_c_2_18 | 15111 | 15902 | + | Exo_endo_phos |
| TC | Rep_916_c_2 | Rep_916_c_2_19 | 15912 | 17576 | + | 4.A.1.1.11 |
| CAZyme | Rep_916_c_2 | Rep_916_c_2_20 | 17771 | 19051 | + | GT30 |
Gene ID: Rep_916_c_2_17
Type: CAZyme
Location: 13326 - 15104 (+)
Type: CAZyme
Location: 13326 - 15104 (+)
Gene ID: Rep_916_c_2_18
Type: pfam
Location: 15111 - 15902 (+)
Type: pfam
Location: 15111 - 15902 (+)
Gene ID: Rep_916_c_2_19
Type: TC
Location: 15912 - 17576 (+)
Type: TC
Location: 15912 - 17576 (+)
Gene ID: Rep_916_c_2_20
Type: CAZyme
Location: 17771 - 19051 (+)
Type: CAZyme
Location: 17771 - 19051 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.