Cluster: Rep_916_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_916
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_916_c_1 | Rep_916_c_1_4 | 3923 | 5554 | - | 2.A.9.3.1 |
| pfam | Rep_916_c_1 | Rep_916_c_1_5 | 5656 | 6090 | - | 4HBT |
| pfam | Rep_916_c_1 | Rep_916_c_1_6 | 6189 | 9281 | - | FAD_binding_4 | FAD-oxidase_C |
| TC | Rep_916_c_1 | Rep_916_c_1_7 | 9879 | 11018 | + | 1.B.6.1.12 |
| CAZyme | Rep_916_c_1 | Rep_916_c_1_8 | 11179 | 13572 | - | GT51 |
Gene ID: Rep_916_c_1_4
Type: TC
Location: 3923 - 5554 (-)
Type: TC
Location: 3923 - 5554 (-)
Gene ID: Rep_916_c_1_5
Type: pfam
Location: 5656 - 6090 (-)
Type: pfam
Location: 5656 - 6090 (-)
Gene ID: Rep_916_c_1_6
Type: pfam
Location: 6189 - 9281 (-)
Type: pfam
Location: 6189 - 9281 (-)
Gene ID: Rep_916_c_1_7
Type: TC
Location: 9879 - 11018 (+)
Type: TC
Location: 9879 - 11018 (+)
Gene ID: Rep_916_c_1_8
Type: CAZyme
Location: 11179 - 13572 (-)
Type: CAZyme
Location: 11179 - 13572 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.