Cluster: Rep_916_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_916
- CGC Family ID: CGCFAM_03795
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_916_c_100 | Rep_916_c_100_1 | 1 | 1269 | + | GH2 |
| pfam | Rep_916_c_100 | Rep_916_c_100_2 | 1349 | 2110 | + | PNP_UDP_1 |
| TC | Rep_916_c_100 | Rep_916_c_100_3 | 2190 | 3557 | - | 2.A.25.1.4 |
| TC | Rep_916_c_100 | Rep_916_c_100_4 | 3927 | 5222 | - | 2.A.40.7.6 |
Gene ID: Rep_916_c_100_1
Type: CAZyme
Location: 1 - 1269 (+)
Type: CAZyme
Location: 1 - 1269 (+)
Gene ID: Rep_916_c_100_2
Type: pfam
Location: 1349 - 2110 (+)
Type: pfam
Location: 1349 - 2110 (+)
Gene ID: Rep_916_c_100_3
Type: TC
Location: 2190 - 3557 (-)
Type: TC
Location: 2190 - 3557 (-)
Gene ID: Rep_916_c_100_4
Type: TC
Location: 3927 - 5222 (-)
Type: TC
Location: 3927 - 5222 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.