Cluster: Rep_916_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_916
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_916_c_0 | Rep_916_c_0_31 | 39795 | 40853 | - | GT28 |
| TC | Rep_916_c_0 | Rep_916_c_0_32 | 40992 | 42170 | - | 2.A.103.1.1 |
| pfam | Rep_916_c_0 | Rep_916_c_0_33 | 42170 | 43471 | - | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | Rep_916_c_0 | Rep_916_c_0_34 | 43632 | 44714 | - | 9.B.146.1.6 |
Gene ID: Rep_916_c_0_31
Type: CAZyme
Location: 39795 - 40853 (-)
Type: CAZyme
Location: 39795 - 40853 (-)
Gene ID: Rep_916_c_0_32
Type: TC
Location: 40992 - 42170 (-)
Type: TC
Location: 40992 - 42170 (-)
Gene ID: Rep_916_c_0_33
Type: pfam
Location: 42170 - 43471 (-)
Type: pfam
Location: 42170 - 43471 (-)
Gene ID: Rep_916_c_0_34
Type: TC
Location: 43632 - 44714 (-)
Type: TC
Location: 43632 - 44714 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.