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Cluster: Rep_911_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_911_c_5 Rep_911_c_5_65 77380 78144 - 3.A.1.14.16
TC Rep_911_c_5 Rep_911_c_5_66 78141 79205 - 3.A.1.14.11
STP Rep_911_c_5 Rep_911_c_5_67 79202 80248 - Peripla_BP_2
TC Rep_911_c_5 Rep_911_c_5_68 80286 82388 - 1.B.14.1.24
TC Rep_911_c_5 Rep_911_c_5_69 82464 83612 + 9.B.169.1.12
NULL(UNKNOWN) Rep_911_c_5 Rep_911_c_5_70 83660 84151 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_911_c_5 Rep_911_c_5_71 84853 86508 - AA3_2
sulfatase Rep_911_c_5 Rep_911_c_5_72 86608 88080 - S1_6
STP Rep_911_c_5 Rep_911_c_5_73 88073 88699 - TetR_N
TC Rep_911_c_5 Rep_911_c_5_74 89128 91188 + 2.A.15.1.4
Gene ID: Rep_911_c_5_65
Type: TC
Location: 77380 - 78144 (-)
Gene ID: Rep_911_c_5_66
Type: TC
Location: 78141 - 79205 (-)
Gene ID: Rep_911_c_5_67
Type: STP
Location: 79202 - 80248 (-)
Gene ID: Rep_911_c_5_68
Type: TC
Location: 80286 - 82388 (-)
Gene ID: Rep_911_c_5_69
Type: TC
Location: 82464 - 83612 (+)
Gene ID: Rep_911_c_5_70
Type:
Location: 83660 - 84151 (-)
Gene ID: Rep_911_c_5_71
Type: CAZyme
Location: 84853 - 86508 (-)
Gene ID: Rep_911_c_5_72
Type: sulfatase
Location: 86608 - 88080 (-)
Gene ID: Rep_911_c_5_73
Type: STP
Location: 88073 - 88699 (-)
Gene ID: Rep_911_c_5_74
Type: TC
Location: 89128 - 91188 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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