Cluster: Rep_911_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_911
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_911_c_3 | Rep_911_c_3_118 | 120534 | 121472 | + | 3.A.1.105.17 |
| TC | Rep_911_c_3 | Rep_911_c_3_119 | 121469 | 122242 | + | 3.A.1.105.17 |
| pfam | Rep_911_c_3 | Rep_911_c_3_120 | 122239 | 123054 | + | QueF | QueF_N |
| NULL(UNKNOWN) | Rep_911_c_3 | Rep_911_c_3_121 | 123077 | 123727 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_911_c_3 | Rep_911_c_3_122 | 123865 | 125007 | + | 2.A.103.1.2 |
| CAZyme | Rep_911_c_3 | Rep_911_c_3_123 | 125041 | 126042 | + | GH103 |
Gene ID: Rep_911_c_3_118
Type: TC
Location: 120534 - 121472 (+)
Type: TC
Location: 120534 - 121472 (+)
Gene ID: Rep_911_c_3_119
Type: TC
Location: 121469 - 122242 (+)
Type: TC
Location: 121469 - 122242 (+)
Gene ID: Rep_911_c_3_120
Type: pfam
Location: 122239 - 123054 (+)
Type: pfam
Location: 122239 - 123054 (+)
Gene ID: Rep_911_c_3_121
Type:
Location: 123077 - 123727 (+)
Type:
Location: 123077 - 123727 (+)
Gene ID: Rep_911_c_3_122
Type: TC
Location: 123865 - 125007 (+)
Type: TC
Location: 123865 - 125007 (+)
Gene ID: Rep_911_c_3_123
Type: CAZyme
Location: 125041 - 126042 (+)
Type: CAZyme
Location: 125041 - 126042 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Moraxellaceae
Genus
Acinetobacter
Species
Acinetobacter ursingii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.