Cluster: Rep_911_CGC18
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_911
- CGC Family ID: CGCFAM_01775
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_911_c_53 | Rep_911_c_53_3 | 2137 | 3288 | - | CBM50 |
| pfam | Rep_911_c_53 | Rep_911_c_53_4 | 3410 | 3934 | + | Pep_deformylase |
| pfam | Rep_911_c_53 | Rep_911_c_53_5 | 4011 | 4451 | + | DUF2946 |
| TC | Rep_911_c_53 | Rep_911_c_53_6 | 4553 | 6595 | + | 1.B.14.4.2 |
Gene ID: Rep_911_c_53_3
Type: CAZyme
Location: 2137 - 3288 (-)
Type: CAZyme
Location: 2137 - 3288 (-)
Gene ID: Rep_911_c_53_4
Type: pfam
Location: 3410 - 3934 (+)
Type: pfam
Location: 3410 - 3934 (+)
Gene ID: Rep_911_c_53_5
Type: pfam
Location: 4011 - 4451 (+)
Type: pfam
Location: 4011 - 4451 (+)
Gene ID: Rep_911_c_53_6
Type: TC
Location: 4553 - 6595 (+)
Type: TC
Location: 4553 - 6595 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Moraxellaceae
Genus
Acinetobacter
Species
Acinetobacter ursingii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.