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Cluster: Rep_911_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_911_c_46 Rep_911_c_46_7 5572 6117 + 3.A.8.1.1
TC Rep_911_c_46 Rep_911_c_46_8 6236 8179 + 1.A.33.1.2
pfam Rep_911_c_46 Rep_911_c_46_9 8280 8780 + FUSC_2
NULL(UNKNOWN) Rep_911_c_46 Rep_911_c_46_10 8871 9290 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_911_c_46 Rep_911_c_46_11 9360 10646 - GH103
pfam Rep_911_c_46 Rep_911_c_46_12 11428 12549 - ATP-grasp | CPSase_L_D2 | PurK_C | RS_preATP-grasp-like
pfam Rep_911_c_46 Rep_911_c_46_13 12560 13075 - AIRC
TC Rep_911_c_46 Rep_911_c_46_14 13505 13858 - 2.A.7.34.1
Gene ID: Rep_911_c_46_7
Type: TC
Location: 5572 - 6117 (+)
Gene ID: Rep_911_c_46_8
Type: TC
Location: 6236 - 8179 (+)
Gene ID: Rep_911_c_46_9
Type: pfam
Location: 8280 - 8780 (+)
Gene ID: Rep_911_c_46_10
Type:
Location: 8871 - 9290 (+)
Gene ID: Rep_911_c_46_11
Type: CAZyme
Location: 9360 - 10646 (-)
Gene ID: Rep_911_c_46_12
Type: pfam
Location: 11428 - 12549 (-)
Gene ID: Rep_911_c_46_13
Type: pfam
Location: 12560 - 13075 (-)
Gene ID: Rep_911_c_46_14
Type: TC
Location: 13505 - 13858 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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