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Cluster: Rep_911_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_911_c_11 Rep_911_c_11_23 27567 28187 - 9.B.18.1.2
CAZyme Rep_911_c_11 Rep_911_c_11_24 28200 29027 - GT2
CAZyme Rep_911_c_11 Rep_911_c_11_25 29034 30068 - GT4
CAZyme Rep_911_c_11 Rep_911_c_11_26 30072 31013 - GT2
pfam Rep_911_c_11 Rep_911_c_11_27 31018 32400 - O-ag_pol_Wzy
CAZyme Rep_911_c_11 Rep_911_c_11_28 32407 33354 - GT2
pfam Rep_911_c_11 Rep_911_c_11_29 33354 34643 - Polysacc_synt_3
pfam Rep_911_c_11 Rep_911_c_11_30 34646 35923 - UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
TC Rep_911_c_11 Rep_911_c_11_31 36015 37235 + 1.B.18.3.1
pfam Rep_911_c_11 Rep_911_c_11_32 37248 37676 + LMWPc
TC Rep_911_c_11 Rep_911_c_11_33 37697 39889 + 8.A.3.3.3
pfam Rep_911_c_11 Rep_911_c_11_34 40080 40787 + FKBP_C | FKBP_N
pfam Rep_911_c_11 Rep_911_c_11_35 41106 41795 + FKBP_C | FKBP_N
TC Rep_911_c_11 Rep_911_c_11_36 41932 43476 - 2.A.66.4.1
Gene ID: Rep_911_c_11_23
Type: TC
Location: 27567 - 28187 (-)
Gene ID: Rep_911_c_11_24
Type: CAZyme
Location: 28200 - 29027 (-)
Gene ID: Rep_911_c_11_25
Type: CAZyme
Location: 29034 - 30068 (-)
Gene ID: Rep_911_c_11_26
Type: CAZyme
Location: 30072 - 31013 (-)
Gene ID: Rep_911_c_11_27
Type: pfam
Location: 31018 - 32400 (-)
Gene ID: Rep_911_c_11_28
Type: CAZyme
Location: 32407 - 33354 (-)
Gene ID: Rep_911_c_11_29
Type: pfam
Location: 33354 - 34643 (-)
Gene ID: Rep_911_c_11_30
Type: pfam
Location: 34646 - 35923 (-)
Gene ID: Rep_911_c_11_31
Type: TC
Location: 36015 - 37235 (+)
Gene ID: Rep_911_c_11_32
Type: pfam
Location: 37248 - 37676 (+)
Gene ID: Rep_911_c_11_33
Type: TC
Location: 37697 - 39889 (+)
Gene ID: Rep_911_c_11_34
Type: pfam
Location: 40080 - 40787 (+)
Gene ID: Rep_911_c_11_35
Type: pfam
Location: 41106 - 41795 (+)
Gene ID: Rep_911_c_11_36
Type: TC
Location: 41932 - 43476 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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