Cluster: Rep_910_CGC8
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 6
- Substrate:
- Genome ID: Rep_910
- CGC Family ID: CGCFAM_03220
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_910_c_39 | Rep_910_c_39_56 | 51065 | 51520 | - | 3.A.15.2.1 |
| pfam | Rep_910_c_39 | Rep_910_c_39_57 | 51951 | 53012 | + | Epimerase_2 |
| pfam | Rep_910_c_39 | Rep_910_c_39_58 | 53037 | 53369 | + | Glycos_transf_1 | Glyco_trans_1_4 |
| CAZyme | Rep_910_c_39 | Rep_910_c_39_59 | 53346 | 54446 | - | GT4 |
| pfam | Rep_910_c_39 | Rep_910_c_39_60 | 54447 | 55541 | - | DAO | Amino_oxidase | GLF | NAD_binding_8 |
| CAZyme | Rep_910_c_39 | Rep_910_c_39_61 | 55543 | 56472 | - | GT2 |
| CAZyme | Rep_910_c_39 | Rep_910_c_39_62 | 56490 | 57482 | - | GT2 |
| CAZyme | Rep_910_c_39 | Rep_910_c_39_63 | 57482 | 58264 | - | GT25 |
| CAZyme | Rep_910_c_39 | Rep_910_c_39_64 | 58268 | 59053 | - | GT32 |
| pfam | Rep_910_c_39 | Rep_910_c_39_65 | 59050 | 59733 | - | Methyltransf_21 |
| TC | Rep_910_c_39 | Rep_910_c_39_66 | 59977 | 61692 | - | 3.A.1.106.15 |
| CAZyme | Rep_910_c_39 | Rep_910_c_39_67 | 61701 | 62549 | - | GT2 |
| NULL(UNKNOWN) | Rep_910_c_39 | Rep_910_c_39_68 | 62539 | 64512 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_910_c_39 | Rep_910_c_39_69 | 64572 | 65000 | - | 3.A.15.2.1 |
Gene ID: Rep_910_c_39_56
Type: TC
Location: 51065 - 51520 (-)
Type: TC
Location: 51065 - 51520 (-)
Gene ID: Rep_910_c_39_57
Type: pfam
Location: 51951 - 53012 (+)
Type: pfam
Location: 51951 - 53012 (+)
Gene ID: Rep_910_c_39_58
Type: pfam
Location: 53037 - 53369 (+)
Type: pfam
Location: 53037 - 53369 (+)
Gene ID: Rep_910_c_39_59
Type: CAZyme
Location: 53346 - 54446 (-)
Type: CAZyme
Location: 53346 - 54446 (-)
Gene ID: Rep_910_c_39_60
Type: pfam
Location: 54447 - 55541 (-)
Type: pfam
Location: 54447 - 55541 (-)
Gene ID: Rep_910_c_39_61
Type: CAZyme
Location: 55543 - 56472 (-)
Type: CAZyme
Location: 55543 - 56472 (-)
Gene ID: Rep_910_c_39_62
Type: CAZyme
Location: 56490 - 57482 (-)
Type: CAZyme
Location: 56490 - 57482 (-)
Gene ID: Rep_910_c_39_63
Type: CAZyme
Location: 57482 - 58264 (-)
Type: CAZyme
Location: 57482 - 58264 (-)
Gene ID: Rep_910_c_39_64
Type: CAZyme
Location: 58268 - 59053 (-)
Type: CAZyme
Location: 58268 - 59053 (-)
Gene ID: Rep_910_c_39_65
Type: pfam
Location: 59050 - 59733 (-)
Type: pfam
Location: 59050 - 59733 (-)
Gene ID: Rep_910_c_39_66
Type: TC
Location: 59977 - 61692 (-)
Type: TC
Location: 59977 - 61692 (-)
Gene ID: Rep_910_c_39_67
Type: CAZyme
Location: 61701 - 62549 (-)
Type: CAZyme
Location: 61701 - 62549 (-)
Gene ID: Rep_910_c_39_68
Type:
Location: 62539 - 64512 (-)
Type:
Location: 62539 - 64512 (-)
Gene ID: Rep_910_c_39_69
Type: TC
Location: 64572 - 65000 (-)
Type: TC
Location: 64572 - 65000 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Moraxellaceae
Genus
Acinetobacter
Species
Acinetobacter junii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.