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Cluster: Rep_910_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_910_c_139 Rep_910_c_139_14 16350 16850 + 4.B.1.1.4
pfam Rep_910_c_139 Rep_910_c_139_15 16887 18023 - GDPD
pfam Rep_910_c_139 Rep_910_c_139_16 18176 19789 - Sulfatase
TC Rep_910_c_139 Rep_910_c_139_17 20108 23212 + 2.A.6.2.4
TC Rep_910_c_139 Rep_910_c_139_18 23512 24849 + 1.A.26.1.2
pfam Rep_910_c_139 Rep_910_c_139_19 24928 25512 + DUF4112
TC Rep_910_c_139 Rep_910_c_139_20 25587 26492 - 9.B.1.1.6
CAZyme Rep_910_c_139 Rep_910_c_139_21 26707 27567 - GH23
pfam Rep_910_c_139 Rep_910_c_139_22 28061 28966 + ATP_bind_3
pfam Rep_910_c_139 Rep_910_c_139_23 29164 29547 + SCP2
CAZyme Rep_910_c_139 Rep_910_c_139_24 29602 30711 - GH23
Gene ID: Rep_910_c_139_14
Type: TC
Location: 16350 - 16850 (+)
Gene ID: Rep_910_c_139_15
Type: pfam
Location: 16887 - 18023 (-)
Gene ID: Rep_910_c_139_16
Type: pfam
Location: 18176 - 19789 (-)
Gene ID: Rep_910_c_139_17
Type: TC
Location: 20108 - 23212 (+)
Gene ID: Rep_910_c_139_18
Type: TC
Location: 23512 - 24849 (+)
Gene ID: Rep_910_c_139_19
Type: pfam
Location: 24928 - 25512 (+)
Gene ID: Rep_910_c_139_20
Type: TC
Location: 25587 - 26492 (-)
Gene ID: Rep_910_c_139_21
Type: CAZyme
Location: 26707 - 27567 (-)
Gene ID: Rep_910_c_139_22
Type: pfam
Location: 28061 - 28966 (+)
Gene ID: Rep_910_c_139_23
Type: pfam
Location: 29164 - 29547 (+)
Gene ID: Rep_910_c_139_24
Type: CAZyme
Location: 29602 - 30711 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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