Cluster: Rep_910_CGC12
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_910
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_910_c_83 | Rep_910_c_83_1 | 213 | 1826 | + | 2.A.58.2.4 |
| STP | Rep_910_c_83 | Rep_910_c_83_2 | 1924 | 2925 | + | PALP |
| CAZyme | Rep_910_c_83 | Rep_910_c_83_3 | 2983 | 3501 | - | GH23 |
| CAZyme | Rep_910_c_83 | Rep_910_c_83_4 | 3864 | 4229 | - | GH23 |
| pfam | Rep_910_c_83 | Rep_910_c_83_5 | 4755 | 4985 | - | DUF2798 |
| CAZyme | Rep_910_c_83 | Rep_910_c_83_6 | 4990 | 5553 | - | AA6 |
Gene ID: Rep_910_c_83_1
Type: TC
Location: 213 - 1826 (+)
Type: TC
Location: 213 - 1826 (+)
Gene ID: Rep_910_c_83_2
Type: STP
Location: 1924 - 2925 (+)
Type: STP
Location: 1924 - 2925 (+)
Gene ID: Rep_910_c_83_3
Type: CAZyme
Location: 2983 - 3501 (-)
Type: CAZyme
Location: 2983 - 3501 (-)
Gene ID: Rep_910_c_83_4
Type: CAZyme
Location: 3864 - 4229 (-)
Type: CAZyme
Location: 3864 - 4229 (-)
Gene ID: Rep_910_c_83_5
Type: pfam
Location: 4755 - 4985 (-)
Type: pfam
Location: 4755 - 4985 (-)
Gene ID: Rep_910_c_83_6
Type: CAZyme
Location: 4990 - 5553 (-)
Type: CAZyme
Location: 4990 - 5553 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Moraxellaceae
Genus
Acinetobacter
Species
Acinetobacter junii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.