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Cluster: Rep_910_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_910_c_81 Rep_910_c_81_25 20295 21422 - 3.A.11.1.3
CAZyme Rep_910_c_81 Rep_910_c_81_26 21432 22583 - CBM50
pfam Rep_910_c_81 Rep_910_c_81_27 22704 23234 + Pep_deformylase
pfam Rep_910_c_81 Rep_910_c_81_28 23256 23693 + DUF2946
TC Rep_910_c_81 Rep_910_c_81_29 23767 25863 + 1.B.14.4.1
NULL(UNKNOWN) Rep_910_c_81 Rep_910_c_81_30 25910 26671 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_910_c_81 Rep_910_c_81_31 27017 30541 - 2.A.21.9.2
TC Rep_910_c_81 Rep_910_c_81_32 30702 31034 + 9.B.136.1.1
TC Rep_910_c_81 Rep_910_c_81_33 31015 32751 + 2.A.21.7.2
pfam Rep_910_c_81 Rep_910_c_81_34 32804 34009 - MPAB_Lcp_cat
STP Rep_910_c_81 Rep_910_c_81_35 34095 34694 + TetR_N
TC Rep_910_c_81 Rep_910_c_81_36 34731 35420 + 1.A.1.28.6
TC Rep_910_c_81 Rep_910_c_81_37 35580 37556 + 2.A.15.1.9
Gene ID: Rep_910_c_81_25
Type: TC
Location: 20295 - 21422 (-)
Gene ID: Rep_910_c_81_26
Type: CAZyme
Location: 21432 - 22583 (-)
Gene ID: Rep_910_c_81_27
Type: pfam
Location: 22704 - 23234 (+)
Gene ID: Rep_910_c_81_28
Type: pfam
Location: 23256 - 23693 (+)
Gene ID: Rep_910_c_81_29
Type: TC
Location: 23767 - 25863 (+)
Gene ID: Rep_910_c_81_30
Type:
Location: 25910 - 26671 (-)
Gene ID: Rep_910_c_81_31
Type: TC
Location: 27017 - 30541 (-)
Gene ID: Rep_910_c_81_32
Type: TC
Location: 30702 - 31034 (+)
Gene ID: Rep_910_c_81_33
Type: TC
Location: 31015 - 32751 (+)
Gene ID: Rep_910_c_81_34
Type: pfam
Location: 32804 - 34009 (-)
Gene ID: Rep_910_c_81_35
Type: STP
Location: 34095 - 34694 (+)
Gene ID: Rep_910_c_81_36
Type: TC
Location: 34731 - 35420 (+)
Gene ID: Rep_910_c_81_37
Type: TC
Location: 35580 - 37556 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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