dbCAN Logo

Cluster: Rep_909_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_909_c_200 Rep_909_c_200_10 8165 11380 + GH23
TC Rep_909_c_200 Rep_909_c_200_11 11396 13231 + 3.A.1.5.21
TC Rep_909_c_200 Rep_909_c_200_12 13263 14315 + 3.A.1.5.24
TC Rep_909_c_200 Rep_909_c_200_13 14315 15325 + 3.A.1.5.21
TC Rep_909_c_200 Rep_909_c_200_14 15303 16895 + 3.A.1.5.21
pfam Rep_909_c_200 Rep_909_c_200_15 17085 18329 + Oxidored_FMN
TC Rep_909_c_200 Rep_909_c_200_16 18371 20485 - 1.B.14.1.24
pfam Rep_909_c_200 Rep_909_c_200_17 20764 21426 - RNase_T | Rv2179c-like
peptidase Rep_909_c_200 Rep_909_c_200_18 21411 22445 - M38.A02
TC Rep_909_c_200 Rep_909_c_200_19 22595 23857 + 9.B.34.1.3
Gene ID: Rep_909_c_200_10
Type: CAZyme
Location: 8165 - 11380 (+)
Gene ID: Rep_909_c_200_11
Type: TC
Location: 11396 - 13231 (+)
Gene ID: Rep_909_c_200_12
Type: TC
Location: 13263 - 14315 (+)
Gene ID: Rep_909_c_200_13
Type: TC
Location: 14315 - 15325 (+)
Gene ID: Rep_909_c_200_14
Type: TC
Location: 15303 - 16895 (+)
Gene ID: Rep_909_c_200_15
Type: pfam
Location: 17085 - 18329 (+)
Gene ID: Rep_909_c_200_16
Type: TC
Location: 18371 - 20485 (-)
Gene ID: Rep_909_c_200_17
Type: pfam
Location: 20764 - 21426 (-)
Gene ID: Rep_909_c_200_18
Type: peptidase
Location: 21411 - 22445 (-)
Gene ID: Rep_909_c_200_19
Type: TC
Location: 22595 - 23857 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List