Cluster: Rep_909_CGC22
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 4
- Substrate:
- Genome ID: Rep_909
- CGC Family ID: CGCFAM_00002
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_909_c_173 | Rep_909_c_173_20 | 19251 | 20078 | + | GT2 |
| CAZyme | Rep_909_c_173 | Rep_909_c_173_21 | 20095 | 21138 | + | GH99 |
| pfam | Rep_909_c_173 | Rep_909_c_173_22 | 21131 | 22147 | + | EpsG |
| CAZyme | Rep_909_c_173 | Rep_909_c_173_23 | 22152 | 22916 | + | GT2 |
| CAZyme | Rep_909_c_173 | Rep_909_c_173_24 | 22916 | 23716 | + | GT2 |
| TC | Rep_909_c_173 | Rep_909_c_173_25 | 23753 | 24355 | + | 9.B.18.1.2 |
Gene ID: Rep_909_c_173_20
Type: CAZyme
Location: 19251 - 20078 (+)
Type: CAZyme
Location: 19251 - 20078 (+)
Gene ID: Rep_909_c_173_21
Type: CAZyme
Location: 20095 - 21138 (+)
Type: CAZyme
Location: 20095 - 21138 (+)
Gene ID: Rep_909_c_173_22
Type: pfam
Location: 21131 - 22147 (+)
Type: pfam
Location: 21131 - 22147 (+)
Gene ID: Rep_909_c_173_23
Type: CAZyme
Location: 22152 - 22916 (+)
Type: CAZyme
Location: 22152 - 22916 (+)
Gene ID: Rep_909_c_173_24
Type: CAZyme
Location: 22916 - 23716 (+)
Type: CAZyme
Location: 22916 - 23716 (+)
Gene ID: Rep_909_c_173_25
Type: TC
Location: 23753 - 24355 (+)
Type: TC
Location: 23753 - 24355 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Moraxellaceae
Genus
Acinetobacter
Species
Acinetobacter pittii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.