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Cluster: Rep_909_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_909_c_173 Rep_909_c_173_5 2827 4368 + 2.A.66.4.1
pfam Rep_909_c_173 Rep_909_c_173_6 4417 5112 - FKBP_C | FKBP_N
pfam Rep_909_c_173 Rep_909_c_173_7 5162 5887 - FKBP_C | FKBP_N
TC Rep_909_c_173 Rep_909_c_173_8 6079 8265 - 8.A.3.3.2
pfam Rep_909_c_173 Rep_909_c_173_9 8285 8713 - LMWPc
TC Rep_909_c_173 Rep_909_c_173_10 8718 9818 - 1.B.18.3.1
pfam Rep_909_c_173 Rep_909_c_173_11 10173 11447 + UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
CAZyme Rep_909_c_173 Rep_909_c_173_12 11477 12316 + GT2
NULL(UNKNOWN) Rep_909_c_173 Rep_909_c_173_13 12310 13212 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_909_c_173 Rep_909_c_173_14 13225 14661 + 2.A.66.2.7
Gene ID: Rep_909_c_173_5
Type: TC
Location: 2827 - 4368 (+)
Gene ID: Rep_909_c_173_6
Type: pfam
Location: 4417 - 5112 (-)
Gene ID: Rep_909_c_173_7
Type: pfam
Location: 5162 - 5887 (-)
Gene ID: Rep_909_c_173_8
Type: TC
Location: 6079 - 8265 (-)
Gene ID: Rep_909_c_173_9
Type: pfam
Location: 8285 - 8713 (-)
Gene ID: Rep_909_c_173_10
Type: TC
Location: 8718 - 9818 (-)
Gene ID: Rep_909_c_173_11
Type: pfam
Location: 10173 - 11447 (+)
Gene ID: Rep_909_c_173_12
Type: CAZyme
Location: 11477 - 12316 (+)
Gene ID: Rep_909_c_173_13
Type:
Location: 12310 - 13212 (+)
Gene ID: Rep_909_c_173_14
Type: TC
Location: 13225 - 14661 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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