Cluster: Rep_909_CGC19
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_909
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_909_c_169 | Rep_909_c_169_92 | 81585 | 82520 | + | 3.A.1.105.17 |
| TC | Rep_909_c_169 | Rep_909_c_169_93 | 82517 | 83290 | + | 3.A.1.105.17 |
| pfam | Rep_909_c_169 | Rep_909_c_169_94 | 83287 | 84099 | + | QueF | QueF_N |
| NULL(UNKNOWN) | Rep_909_c_169 | Rep_909_c_169_95 | 84123 | 84773 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_909_c_169 | Rep_909_c_169_96 | 84900 | 86042 | + | 2.A.103.1.2 |
| CAZyme | Rep_909_c_169 | Rep_909_c_169_97 | 86062 | 87063 | + | GH103 |
Gene ID: Rep_909_c_169_92
Type: TC
Location: 81585 - 82520 (+)
Type: TC
Location: 81585 - 82520 (+)
Gene ID: Rep_909_c_169_93
Type: TC
Location: 82517 - 83290 (+)
Type: TC
Location: 82517 - 83290 (+)
Gene ID: Rep_909_c_169_94
Type: pfam
Location: 83287 - 84099 (+)
Type: pfam
Location: 83287 - 84099 (+)
Gene ID: Rep_909_c_169_95
Type:
Location: 84123 - 84773 (+)
Type:
Location: 84123 - 84773 (+)
Gene ID: Rep_909_c_169_96
Type: TC
Location: 84900 - 86042 (+)
Type: TC
Location: 84900 - 86042 (+)
Gene ID: Rep_909_c_169_97
Type: CAZyme
Location: 86062 - 87063 (+)
Type: CAZyme
Location: 86062 - 87063 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Moraxellaceae
Genus
Acinetobacter
Species
Acinetobacter pittii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.