Cluster: Rep_909_CGC18
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_909
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_909_c_168 | Rep_909_c_168_2 | 1141 | 1899 | - | GH25 |
| TC | Rep_909_c_168 | Rep_909_c_168_3 | 1976 | 3367 | - | 2.A.1.3.26 |
| pfam | Rep_909_c_168 | Rep_909_c_168_4 | 3539 | 4162 | - | Lysine_decarbox | LDcluster4 |
| TC | Rep_909_c_168 | Rep_909_c_168_5 | 4489 | 6078 | + | 2.A.109.2.3 |
Gene ID: Rep_909_c_168_2
Type: CAZyme
Location: 1141 - 1899 (-)
Type: CAZyme
Location: 1141 - 1899 (-)
Gene ID: Rep_909_c_168_3
Type: TC
Location: 1976 - 3367 (-)
Type: TC
Location: 1976 - 3367 (-)
Gene ID: Rep_909_c_168_4
Type: pfam
Location: 3539 - 4162 (-)
Type: pfam
Location: 3539 - 4162 (-)
Gene ID: Rep_909_c_168_5
Type: TC
Location: 4489 - 6078 (+)
Type: TC
Location: 4489 - 6078 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Moraxellaceae
Genus
Acinetobacter
Species
Acinetobacter pittii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.