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Cluster: Rep_909_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_909_c_141 Rep_909_c_141_31 30409 31365 - 2.A.109.1.7
TC Rep_909_c_141 Rep_909_c_141_32 31683 32279 - 9.B.105.1.3
pfam Rep_909_c_141 Rep_909_c_141_33 32415 33665 + LtrA
pfam Rep_909_c_141 Rep_909_c_141_34 33732 35105 - Mur_ligase | Mur_ligase_C | Mur_ligase_M
TC Rep_909_c_141 Rep_909_c_141_35 35343 35708 + 2.A.7.34.1
pfam Rep_909_c_141 Rep_909_c_141_36 35992 36507 + AIRC
pfam Rep_909_c_141 Rep_909_c_141_37 36517 37638 + ATP-grasp | CPSase_L_D2 | PurK_C | RS_preATP-grasp-like
CAZyme Rep_909_c_141 Rep_909_c_141_38 38325 39617 + GH103
Gene ID: Rep_909_c_141_31
Type: TC
Location: 30409 - 31365 (-)
Gene ID: Rep_909_c_141_32
Type: TC
Location: 31683 - 32279 (-)
Gene ID: Rep_909_c_141_33
Type: pfam
Location: 32415 - 33665 (+)
Gene ID: Rep_909_c_141_34
Type: pfam
Location: 33732 - 35105 (-)
Gene ID: Rep_909_c_141_35
Type: TC
Location: 35343 - 35708 (+)
Gene ID: Rep_909_c_141_36
Type: pfam
Location: 35992 - 36507 (+)
Gene ID: Rep_909_c_141_37
Type: pfam
Location: 36517 - 37638 (+)
Gene ID: Rep_909_c_141_38
Type: CAZyme
Location: 38325 - 39617 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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