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Cluster: Rep_909_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_909_c_106 Rep_909_c_106_11 7456 7785 - 3.D.4.5.1
TC Rep_909_c_106 Rep_909_c_106_12 7785 8405 - 3.D.4.5.1
TC Rep_909_c_106 Rep_909_c_106_13 8410 10401 - 3.D.4.5.1
TC Rep_909_c_106 Rep_909_c_106_14 10405 11457 - 3.D.4.5.1
pfam Rep_909_c_106 Rep_909_c_106_15 11774 12529 - RDD | GYF_2
TC Rep_909_c_106 Rep_909_c_106_16 12594 14972 - 8.A.7.1.4
pfam Rep_909_c_106 Rep_909_c_106_17 15129 15965 + Kinase-PPPase
pfam Rep_909_c_106 Rep_909_c_106_18 16353 18791 + PgaA_barrel
CAZyme Rep_909_c_106 Rep_909_c_106_19 18791 20617 + CE4
CAZyme Rep_909_c_106 Rep_909_c_106_20 20617 21864 + GT2
Gene ID: Rep_909_c_106_11
Type: TC
Location: 7456 - 7785 (-)
Gene ID: Rep_909_c_106_12
Type: TC
Location: 7785 - 8405 (-)
Gene ID: Rep_909_c_106_13
Type: TC
Location: 8410 - 10401 (-)
Gene ID: Rep_909_c_106_14
Type: TC
Location: 10405 - 11457 (-)
Gene ID: Rep_909_c_106_15
Type: pfam
Location: 11774 - 12529 (-)
Gene ID: Rep_909_c_106_16
Type: TC
Location: 12594 - 14972 (-)
Gene ID: Rep_909_c_106_17
Type: pfam
Location: 15129 - 15965 (+)
Gene ID: Rep_909_c_106_18
Type: pfam
Location: 16353 - 18791 (+)
Gene ID: Rep_909_c_106_19
Type: CAZyme
Location: 18791 - 20617 (+)
Gene ID: Rep_909_c_106_20
Type: CAZyme
Location: 20617 - 21864 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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