Cluster: Rep_893_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_893
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_893_c_1 | Rep_893_c_1_185 | 207809 | 209116 | + | 3.A.1.1.23 |
| TC | Rep_893_c_1 | Rep_893_c_1_186 | 209229 | 210329 | + | 3.A.1.1.23 |
| TC | Rep_893_c_1 | Rep_893_c_1_187 | 210326 | 211399 | + | 3.A.1.1.23 |
| CAZyme | Rep_893_c_1 | Rep_893_c_1_188 | 211396 | 212844 | + | GH1 |
Gene ID: Rep_893_c_1_185
Type: TC
Location: 207809 - 209116 (+)
Type: TC
Location: 207809 - 209116 (+)
Gene ID: Rep_893_c_1_186
Type: TC
Location: 209229 - 210329 (+)
Type: TC
Location: 209229 - 210329 (+)
Gene ID: Rep_893_c_1_187
Type: TC
Location: 210326 - 211399 (+)
Type: TC
Location: 210326 - 211399 (+)
Gene ID: Rep_893_c_1_188
Type: CAZyme
Location: 211396 - 212844 (+)
Type: CAZyme
Location: 211396 - 212844 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Pauljensenia
Species
Pauljensenia radingae_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.