Cluster: Rep_893_CGC40
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_893
- CGC Family ID: CGCFAM_00711
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_893_c_21 | Rep_893_c_21_10 | 12987 | 14687 | - | GH13_10 |
| CAZyme | Rep_893_c_21 | Rep_893_c_21_11 | 14684 | 17191 | - | GH13_26 |
| CAZyme | Rep_893_c_21 | Rep_893_c_21_12 | 17193 | 19304 | - | GH13_11 |
| TC | Rep_893_c_21 | Rep_893_c_21_13 | 20006 | 20758 | + | 2.A.61.1.2 |
| TC | Rep_893_c_21 | Rep_893_c_21_14 | 20875 | 21423 | + | 2.A.61.1.2 |
Gene ID: Rep_893_c_21_10
Type: CAZyme
Location: 12987 - 14687 (-)
Type: CAZyme
Location: 12987 - 14687 (-)
Gene ID: Rep_893_c_21_11
Type: CAZyme
Location: 14684 - 17191 (-)
Type: CAZyme
Location: 14684 - 17191 (-)
Gene ID: Rep_893_c_21_12
Type: CAZyme
Location: 17193 - 19304 (-)
Type: CAZyme
Location: 17193 - 19304 (-)
Gene ID: Rep_893_c_21_13
Type: TC
Location: 20006 - 20758 (+)
Type: TC
Location: 20006 - 20758 (+)
Gene ID: Rep_893_c_21_14
Type: TC
Location: 20875 - 21423 (+)
Type: TC
Location: 20875 - 21423 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Pauljensenia
Species
Pauljensenia radingae_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.