Cluster: Rep_893_CGC4
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_893
- CGC Family ID: CGCFAM_02488
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_893_c_1 | Rep_893_c_1_127 | 146820 | 148271 | + | 2.A.66.1.28 |
| NULL(UNKNOWN) | Rep_893_c_1 | Rep_893_c_1_128 | 148148 | 148405 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_893_c_1 | Rep_893_c_1_129 | 148467 | 148757 | + | Ribosomal_S6 |
| TC | Rep_893_c_1 | Rep_893_c_1_130 | 148794 | 149357 | + | 3.A.7.19.1 |
| pfam | Rep_893_c_1 | Rep_893_c_1_131 | 149474 | 149716 | + | Ribosomal_S18 |
| pfam | Rep_893_c_1 | Rep_893_c_1_132 | 149740 | 150198 | + | Ribosomal_L9_N | Ribosomal_L9_C |
| CAZyme | Rep_893_c_1 | Rep_893_c_1_133 | 150395 | 152656 | - | GT51 |
Gene ID: Rep_893_c_1_127
Type: TC
Location: 146820 - 148271 (+)
Type: TC
Location: 146820 - 148271 (+)
Gene ID: Rep_893_c_1_128
Type:
Location: 148148 - 148405 (-)
Type:
Location: 148148 - 148405 (-)
Gene ID: Rep_893_c_1_129
Type: pfam
Location: 148467 - 148757 (+)
Type: pfam
Location: 148467 - 148757 (+)
Gene ID: Rep_893_c_1_130
Type: TC
Location: 148794 - 149357 (+)
Type: TC
Location: 148794 - 149357 (+)
Gene ID: Rep_893_c_1_131
Type: pfam
Location: 149474 - 149716 (+)
Type: pfam
Location: 149474 - 149716 (+)
Gene ID: Rep_893_c_1_132
Type: pfam
Location: 149740 - 150198 (+)
Type: pfam
Location: 149740 - 150198 (+)
Gene ID: Rep_893_c_1_133
Type: CAZyme
Location: 150395 - 152656 (-)
Type: CAZyme
Location: 150395 - 152656 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Pauljensenia
Species
Pauljensenia radingae_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.