Cluster: Rep_893_CGC38
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_893
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_893_c_19 | Rep_893_c_19_17 | 23491 | 24432 | + | 3.A.1.1.18 |
| TC | Rep_893_c_19 | Rep_893_c_19_18 | 24429 | 25238 | + | 3.A.1.1.18 |
| CAZyme | Rep_893_c_19 | Rep_893_c_19_19 | 25279 | 28509 | + | CBM9 |
| pfam | Rep_893_c_19 | Rep_893_c_19_20 | 28506 | 29999 | - | APP1_cat |
| CAZyme | Rep_893_c_19 | Rep_893_c_19_21 | 29983 | 32673 | - | GH3 |
Gene ID: Rep_893_c_19_17
Type: TC
Location: 23491 - 24432 (+)
Type: TC
Location: 23491 - 24432 (+)
Gene ID: Rep_893_c_19_18
Type: TC
Location: 24429 - 25238 (+)
Type: TC
Location: 24429 - 25238 (+)
Gene ID: Rep_893_c_19_19
Type: CAZyme
Location: 25279 - 28509 (+)
Type: CAZyme
Location: 25279 - 28509 (+)
Gene ID: Rep_893_c_19_20
Type: pfam
Location: 28506 - 29999 (-)
Type: pfam
Location: 28506 - 29999 (-)
Gene ID: Rep_893_c_19_21
Type: CAZyme
Location: 29983 - 32673 (-)
Type: CAZyme
Location: 29983 - 32673 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Pauljensenia
Species
Pauljensenia radingae_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.