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Cluster: Rep_893_CGC37

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_893_c_19 Rep_893_c_19_3 2233 3303 - 8.A.5.1.3
pfam Rep_893_c_19 Rep_893_c_19_4 3534 5195 + FGGY_N | FGGY_C
sulfatase Rep_893_c_19 Rep_893_c_19_5 5134 6660 + S1_46
CAZyme Rep_893_c_19 Rep_893_c_19_6 6665 7072 - CE7
TC Rep_893_c_19 Rep_893_c_19_7 7212 9140 - 3.A.1.5.26
TC Rep_893_c_19 Rep_893_c_19_8 9137 10111 - 3.A.1.5.35
TC Rep_893_c_19 Rep_893_c_19_9 10104 11030 - 3.A.1.5.35
TC Rep_893_c_19 Rep_893_c_19_10 11425 13041 - 3.A.1.5.35
pfam Rep_893_c_19 Rep_893_c_19_11 13376 14068 + CoaE
pfam Rep_893_c_19 Rep_893_c_19_12 14126 18574 - Metallophos | LTD
CAZyme Rep_893_c_19 Rep_893_c_19_13 18697 20091 - GH4
Gene ID: Rep_893_c_19_3
Type: TC
Location: 2233 - 3303 (-)
Gene ID: Rep_893_c_19_4
Type: pfam
Location: 3534 - 5195 (+)
Gene ID: Rep_893_c_19_5
Type: sulfatase
Location: 5134 - 6660 (+)
Gene ID: Rep_893_c_19_6
Type: CAZyme
Location: 6665 - 7072 (-)
Gene ID: Rep_893_c_19_7
Type: TC
Location: 7212 - 9140 (-)
Gene ID: Rep_893_c_19_8
Type: TC
Location: 9137 - 10111 (-)
Gene ID: Rep_893_c_19_9
Type: TC
Location: 10104 - 11030 (-)
Gene ID: Rep_893_c_19_10
Type: TC
Location: 11425 - 13041 (-)
Gene ID: Rep_893_c_19_11
Type: pfam
Location: 13376 - 14068 (+)
Gene ID: Rep_893_c_19_12
Type: pfam
Location: 14126 - 18574 (-)
Gene ID: Rep_893_c_19_13
Type: CAZyme
Location: 18697 - 20091 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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