Cluster: Rep_893_CGC35
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_893
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_893_c_17 | Rep_893_c_17_7 | 3734 | 5575 | - | GH35 |
| TC | Rep_893_c_17 | Rep_893_c_17_8 | 5572 | 7233 | - | 3.A.1.5.2 |
| TC | Rep_893_c_17 | Rep_893_c_17_9 | 7268 | 8101 | - | 3.A.1.5.19 |
| TC | Rep_893_c_17 | Rep_893_c_17_10 | 8088 | 9098 | - | 3.A.1.5.15 |
| TC | Rep_893_c_17 | Rep_893_c_17_11 | 9095 | 10042 | - | 3.A.1.5.14 |
| TC | Rep_893_c_17 | Rep_893_c_17_12 | 10042 | 11112 | - | 3.A.1.5.6 |
Gene ID: Rep_893_c_17_7
Type: CAZyme
Location: 3734 - 5575 (-)
Type: CAZyme
Location: 3734 - 5575 (-)
Gene ID: Rep_893_c_17_8
Type: TC
Location: 5572 - 7233 (-)
Type: TC
Location: 5572 - 7233 (-)
Gene ID: Rep_893_c_17_9
Type: TC
Location: 7268 - 8101 (-)
Type: TC
Location: 7268 - 8101 (-)
Gene ID: Rep_893_c_17_10
Type: TC
Location: 8088 - 9098 (-)
Type: TC
Location: 8088 - 9098 (-)
Gene ID: Rep_893_c_17_11
Type: TC
Location: 9095 - 10042 (-)
Type: TC
Location: 9095 - 10042 (-)
Gene ID: Rep_893_c_17_12
Type: TC
Location: 10042 - 11112 (-)
Type: TC
Location: 10042 - 11112 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Pauljensenia
Species
Pauljensenia radingae_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.