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Cluster: Rep_893_CGC34

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_893_c_15 Rep_893_c_15_43 50160 51269 + 2.A.89.3.1
TC Rep_893_c_15 Rep_893_c_15_44 51289 52044 + 1.A.62.2.1
pfam Rep_893_c_15 Rep_893_c_15_45 52044 52685 + SRAP
TC Rep_893_c_15 Rep_893_c_15_46 52720 54174 + 2.A.3.1.12
pfam Rep_893_c_15 Rep_893_c_15_47 54224 54886 + GmrSD_C
pfam Rep_893_c_15 Rep_893_c_15_48 54904 55755 + DUF5926
CAZyme Rep_893_c_15 Rep_893_c_15_49 55789 56604 + GT2
TC Rep_893_c_15 Rep_893_c_15_50 56528 58828 - 3.A.3.5.31
Gene ID: Rep_893_c_15_43
Type: TC
Location: 50160 - 51269 (+)
Gene ID: Rep_893_c_15_44
Type: TC
Location: 51289 - 52044 (+)
Gene ID: Rep_893_c_15_45
Type: pfam
Location: 52044 - 52685 (+)
Gene ID: Rep_893_c_15_46
Type: TC
Location: 52720 - 54174 (+)
Gene ID: Rep_893_c_15_47
Type: pfam
Location: 54224 - 54886 (+)
Gene ID: Rep_893_c_15_48
Type: pfam
Location: 54904 - 55755 (+)
Gene ID: Rep_893_c_15_49
Type: CAZyme
Location: 55789 - 56604 (+)
Gene ID: Rep_893_c_15_50
Type: TC
Location: 56528 - 58828 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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